Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 RPSAP43-201ENST00000402237 625 ntBASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 AC004832.2-201ENST00000426397 482 ntBASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 AC079781.4-201ENST00000641908 219 ntBASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 AC009113.1-201ENST00000570267 2443 ntBASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 GPR89P-201ENST00000407924 1495 ntBASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.09■□□□□ 0.81
CTDP1Q9Y5B0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 MRPL20P1-201ENST00000400819 433 ntBASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 RPS8P6-201ENST00000426177 609 ntBASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 PRSS29P-201ENST00000440800 595 ntBASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 AC112482.1-201ENST00000492080 688 ntBASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 GGTLC5P-201ENST00000617623 998 ntBASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 AL805961.1-202ENST00000641562 540 ntBASIC20.08■□□□□ 0.81
CTDP1Q9Y5B0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTDP1Q9Y5B0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTDP1Q9Y5B0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTDP1Q9Y5B0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTDP1Q9Y5B0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTDP1Q9Y5B0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 PTCHD3P3-201ENST00000403073 906 ntBASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 AL353135.1-201ENST00000606729 504 ntBASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 ABALON-201ENST00000629058 1903 ntBASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.07■□□□□ 0.8
CTDP1Q9Y5B0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.06■□□□□ 0.8
CTDP1Q9Y5B0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms