Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 AC068472.1-201ENST00000474589 881 ntBASIC14.09□□□□□ -0.15
FOXA2Q9Y261 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 AC093458.2-201ENST00000623150 629 ntBASIC14.09□□□□□ -0.15
FOXA2Q9Y261 AC124864.1-201ENST00000623408 392 ntBASIC14.09□□□□□ -0.15
FOXA2Q9Y261 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.09□□□□□ -0.15
FOXA2Q9Y261 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 KRT18P1-202ENST00000452408 1331 ntBASIC14.09□□□□□ -0.15
FOXA2Q9Y261 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA2Q9Y261 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FOXA2Q9Y261 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.08□□□□□ -0.15
FOXA2Q9Y261 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 AC011840.4-201ENST00000578471 627 ntBASIC14.08□□□□□ -0.16
FOXA2Q9Y261 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.08□□□□□ -0.16
FOXA2Q9Y261 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXA2Q9Y261 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.07□□□□□ -0.16
FOXA2Q9Y261 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.07□□□□□ -0.16
FOXA2Q9Y261 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms