Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 SEC13-212ENST00000432213 594 ntTSL 413.43□□□□□ -0.267e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-211ENST00000431352 832 ntTSL 513.22□□□□□ -0.297e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-204ENST00000397099 555 ntTSL 413.1□□□□□ -0.317e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.347e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-205ENST00000397101 592 ntTSL 212.86□□□□□ -0.357e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.14□□□□□ -0.477e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC11.97□□□□□ -0.497e-9■■□□□ 12.4
CSTF2TQ9H0L4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.01■□□□□ 0.635e-8■■□□□ 12.4
CSTF2TQ9H0L4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.035e-8■■□□□ 12.4
CSTF2TQ9H0L4 GTPBP3-216ENST00000598038 2917 ntTSL 514.52□□□□□ -0.095e-8■■□□□ 12.4
CSTF2TQ9H0L4 GPR162-207ENST00000545321 683 ntTSL 223.92■■□□□ 1.423e-6■■□□□ 12.4
CSTF2TQ9H0L4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.953e-6■■□□□ 12.4
CSTF2TQ9H0L4 P3H3-208ENST00000544813 573 ntTSL 514.57□□□□□ -0.083e-6■■□□□ 12.4
CSTF2TQ9H0L4 P3H3-202ENST00000536140 3226 ntTSL 213.2□□□□□ -0.33e-6■■□□□ 12.4
CSTF2TQ9H0L4 NFATC3-209ENST00000561714 792 ntTSL 321.61■■□□□ 1.051e-7■■□□□ 12.4
CSTF2TQ9H0L4 NFATC3-219ENST00000568466 737 ntTSL 219.9■□□□□ 0.781e-7■■□□□ 12.4
CSTF2TQ9H0L4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.64□□□□□ -0.071e-7■■□□□ 12.4
CSTF2TQ9H0L4 FAM102A-206ENST00000493175 423 ntTSL 312.05□□□□□ -0.482e-6■■□□□ 12.4
CSTF2TQ9H0L4 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.552e-6■■□□□ 12.4
CSTF2TQ9H0L4 LTB4R2-203ENST00000530080 1108 ntTSL 1 (best)26.86■■□□□ 1.891e-6■■□□□ 12.4
CSTF2TQ9H0L4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.251e-6■■□□□ 12.4
CSTF2TQ9H0L4 Z98749.2-206ENST00000381645 938 ntTSL 219.74■□□□□ 0.751e-6■■□□□ 12.4
CSTF2TQ9H0L4 RAB4B-207ENST00000602069 587 ntTSL 518.12■□□□□ 0.491e-6■■□□□ 12.4
CSTF2TQ9H0L4 PLCD3-201ENST00000538093 546 ntTSL 417.84■□□□□ 0.451e-6■■□□□ 12.4
CSTF2TQ9H0L4 RAB4B-206ENST00000600078 715 ntTSL 517.69■□□□□ 0.421e-6■■□□□ 12.4
CSTF2TQ9H0L4 SH3BP2-214ENST00000509677 1087 ntTSL 316.94■□□□□ 0.31e-6■■□□□ 12.4
CSTF2TQ9H0L4 PLCD3-206ENST00000544446 503 ntTSL 416.88■□□□□ 0.291e-6■■□□□ 12.4
CSTF2TQ9H0L4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.171e-6■■□□□ 12.4
CSTF2TQ9H0L4 GLCE-204ENST00000559798 1308 ntTSL 1 (best)16■□□□□ 0.151e-6■■□□□ 12.4
CSTF2TQ9H0L4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.78■□□□□ 0.121e-6■■□□□ 12.4
CSTF2TQ9H0L4 Z98749.2-203ENST00000407491 574 ntTSL 315.74■□□□□ 0.112e-7■■□□□ 12.4
CSTF2TQ9H0L4 Z98749.2-209ENST00000455209 792 ntTSL 315.74■□□□□ 0.112e-7■■□□□ 12.4
CSTF2TQ9H0L4 PLCD3-208ENST00000590644 595 ntTSL 415.5■□□□□ 0.071e-6■■□□□ 12.4
CSTF2TQ9H0L4 Z98749.2-210ENST00000454577 468 ntTSL 315.2■□□□□ 0.022e-7■■□□□ 12.4
CSTF2TQ9H0L4 Z98749.2-204ENST00000443042 579 ntTSL 415.12■□□□□ 0.012e-7■■□□□ 12.4
CSTF2TQ9H0L4 SH3BP2-228ENST00000515737 2579 ntTSL 215.03■□□□□ -01e-6■■□□□ 12.4
CSTF2TQ9H0L4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.82□□□□□ -0.042e-7■■□□□ 12.4
CSTF2TQ9H0L4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.74□□□□□ -0.052e-7■■□□□ 12.4
CSTF2TQ9H0L4 RAB4B-202ENST00000378307 890 ntTSL 1 (best)14.39□□□□□ -0.111e-6■■□□□ 12.4
CSTF2TQ9H0L4 STK11-206ENST00000586358 770 ntTSL 514.03□□□□□ -0.162e-8■■□□□ 12.4
CSTF2TQ9H0L4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.161e-6■■□□□ 12.4
CSTF2TQ9H0L4 Z98749.2-205ENST00000457665 974 ntTSL 213.62□□□□□ -0.232e-7■■□□□ 12.4
CSTF2TQ9H0L4 MNT-207ENST00000575374 936 ntTSL 313.57□□□□□ -0.244e-7■■□□□ 12.4
CSTF2TQ9H0L4 STK11-209ENST00000593219 637 ntTSL 312.93□□□□□ -0.342e-8■■□□□ 12.4
CSTF2TQ9H0L4 STK11-204ENST00000585851 505 ntTSL 312.85□□□□□ -0.352e-8■■□□□ 12.4
CSTF2TQ9H0L4 EPS15L1-208ENST00000595845 567 ntTSL 212.81□□□□□ -0.361e-6■■□□□ 12.4
CSTF2TQ9H0L4 EPS15L1-209ENST00000596037 629 ntTSL 311.17□□□□□ -0.621e-6■■□□□ 12.4
CSTF2TQ9H0L4 MYO18A-219ENST00000585573 319 ntTSL 311.17□□□□□ -0.621e-6■■□□□ 12.4
CSTF2TQ9H0L4 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.651e-6■■□□□ 12.4
CSTF2TQ9H0L4 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.711e-6■■□□□ 12.4
CSTF2TQ9H0L4 EPS15L1-205ENST00000593760 583 ntTSL 410.61□□□□□ -0.711e-6■■□□□ 12.4
CSTF2TQ9H0L4 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.731e-6■■□□□ 12.4
CSTF2TQ9H0L4 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC10.27□□□□□ -0.771e-6■■□□□ 12.4
CSTF2TQ9H0L4 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.771e-6■■□□□ 12.4
CSTF2TQ9H0L4 MIA-RAB4B-201ENST00000600729 1229 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.891e-6■■□□□ 12.4
CSTF2TQ9H0L4 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC8.93□□□□□ -0.981e-6■■□□□ 12.4
CSTF2TQ9H0L4 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC8.13□□□□□ -1.111e-6■■□□□ 12.4
CSTF2TQ9H0L4 EPS15L1-211ENST00000597559 743 ntTSL 28.07□□□□□ -1.121e-6■■□□□ 12.4
CSTF2TQ9H0L4 EPS15L1-216ENST00000602151 420 ntTSL 27.98□□□□□ -1.131e-6■■□□□ 12.4
CSTF2TQ9H0L4 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.271e-6■■□□□ 12.4
CSTF2TQ9H0L4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61e-6■■□□□ 12.4
CSTF2TQ9H0L4 MYO18A-222ENST00000590565 261 ntTSL 33.58□□□□□ -1.841e-6■■□□□ 12.4
CSTF2TQ9H0L4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.627e-8■■□□□ 12.4
CSTF2TQ9H0L4 ARID4B-204ENST00000418304 1759 ntTSL 515.8■□□□□ 0.127e-8■■□□□ 12.4
CSTF2TQ9H0L4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.07■□□□□ 07e-8■■□□□ 12.4
CSTF2TQ9H0L4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.267e-8■■□□□ 12.4
CSTF2TQ9H0L4 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)12.02□□□□□ -0.497e-8■■□□□ 12.4
CSTF2TQ9H0L4 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)10.47□□□□□ -0.737e-8■■□□□ 12.4
CSTF2TQ9H0L4 VPS13D-202ENST00000460333 4910 ntTSL 25.92□□□□□ -1.461e-6■■□□□ 12.4
CSTF2TQ9H0L4 VPS13D-201ENST00000011700 10969 ntTSL 1 (best)5.91□□□□□ -1.461e-6■■□□□ 12.4
CSTF2TQ9H0L4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.29■□□□□ 0.369e-12■■□□□ 12.4
CSTF2TQ9H0L4 SRC-206ENST00000472968 461 ntTSL 315.97■□□□□ 0.153e-7■■□□□ 12.4
CSTF2TQ9H0L4 WDTC1-205ENST00000491239 5149 ntTSL 212.64□□□□□ -0.399e-9■■□□□ 12.4
CSTF2TQ9H0L4 WDTC1-203ENST00000447062 3115 ntTSL 212.18□□□□□ -0.469e-9■■□□□ 12.4
CSTF2TQ9H0L4 PRPSAP1-205ENST00000442767 908 ntTSL 521.5■■□□□ 1.031e-6■■□□□ 12.4
CSTF2TQ9H0L4 PRPSAP1-202ENST00000423915 549 ntTSL 415.68■□□□□ 0.11e-6■■□□□ 12.4
CSTF2TQ9H0L4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.424e-7■■□□□ 12.4
CSTF2TQ9H0L4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.424e-7■■□□□ 12.4
CSTF2TQ9H0L4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.87■□□□□ 0.294e-7■■□□□ 12.4
CSTF2TQ9H0L4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.65■□□□□ 0.14e-7■■□□□ 12.4
CSTF2TQ9H0L4 PRELID3A-207ENST00000589952 488 ntTSL 415.31■□□□□ 0.044e-7■■□□□ 12.4
CSTF2TQ9H0L4 PRELID3A-206ENST00000589565 777 ntTSL 315.27■□□□□ 0.044e-7■■□□□ 12.4
CSTF2TQ9H0L4 PRELID3A-205ENST00000588729 529 ntTSL 414.81□□□□□ -0.044e-7■■□□□ 12.4
CSTF2TQ9H0L4 PRELID3A-204ENST00000587862 580 ntTSL 514.68□□□□□ -0.064e-7■■□□□ 12.4
CSTF2TQ9H0L4 CDK18-204ENST00000443813 591 ntTSL 418.27■□□□□ 0.521e-6■■□□□ 12.4
CSTF2TQ9H0L4 CDK18-215ENST00000506215 435 ntTSL 1 (best)16.06■□□□□ 0.161e-6■■□□□ 12.4
CSTF2TQ9H0L4 CDK18-202ENST00000419301 949 ntTSL 515.29■□□□□ 0.041e-6■■□□□ 12.4
CSTF2TQ9H0L4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.246e-7■■□□□ 12.4
CSTF2TQ9H0L4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.236e-7■■□□□ 12.4
CSTF2TQ9H0L4 SCNN1D-204ENST00000379101 2268 ntTSL 1 (best)14.95□□□□□ -0.026e-7■■□□□ 12.4
CSTF2TQ9H0L4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.246e-7■■□□□ 12.4
CSTF2TQ9H0L4 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.596e-7■■□□□ 12.4
CSTF2TQ9H0L4 SCNN1D-208ENST00000470022 645 ntTSL 310.97□□□□□ -0.656e-7■■□□□ 12.4
CSTF2TQ9H0L4 MAP2K3-212ENST00000534743 541 ntTSL 416.41■□□□□ 0.221e-6■■□□□ 12.4
CSTF2TQ9H0L4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.599e-7■■□□□ 12.4
CSTF2TQ9H0L4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.36■□□□□ 0.379e-7■■□□□ 12.4
CSTF2TQ9H0L4 CDK18-218ENST00000507067 342 ntTSL 1 (best)16.72■□□□□ 0.279e-7■■□□□ 12.4
CSTF2TQ9H0L4 CDK18-221ENST00000512922 1134 ntTSL 216.31■□□□□ 0.29e-7■■□□□ 12.4
CSTF2TQ9H0L4 CDK18-213ENST00000504648 2435 ntTSL 215.26■□□□□ 0.039e-7■■□□□ 12.4
CSTF2TQ9H0L4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.059e-7■■□□□ 12.4
Retrieved 100 of 19,151 protein–RNA pairs in 261.2 ms