RNA–Protein interactions for RNA: ENST00000447062.2

WDTC1-203, Transcript of WD and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene WDTC1, Length 3,115 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDTC1-203ENST00000447062 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
WDTC1-203ENST00000447062 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
WDTC1-203ENST00000447062 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
WDTC1-203ENST00000447062 HRCP23327 699 aa21.43■■□□□ 1.02
WDTC1-203ENST00000447062 PCGF6Q9BYE7 350 aa21.22■□□□□ 0.99
WDTC1-203ENST00000447062 PPARGC1BQ86YN6 1023 aaKnown RBP21.19■□□□□ 0.98
WDTC1-203ENST00000447062 MYO15BQ96JP2 1530 aa21.02■□□□□ 0.96
WDTC1-203ENST00000447062 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
WDTC1-203ENST00000447062 LOC105371045A0A1W2PR82 267 aa20.6■□□□□ 0.89
WDTC1-203ENST00000447062 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.88
WDTC1-203ENST00000447062 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
WDTC1-203ENST00000447062 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
WDTC1-203ENST00000447062 TRIM26Q12899 539 aaPredicted RBP20.39■□□□□ 0.85
WDTC1-203ENST00000447062 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
WDTC1-203ENST00000447062 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
WDTC1-203ENST00000447062 ZEB1P37275 1124 aaPredicted RBP20.12■□□□□ 0.81
WDTC1-203ENST00000447062 CCDC180Q9P1Z9 1646 aa20.1■□□□□ 0.81
WDTC1-203ENST00000447062 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.79
WDTC1-203ENST00000447062 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
WDTC1-203ENST00000447062 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
WDTC1-203ENST00000447062 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
WDTC1-203ENST00000447062 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
WDTC1-203ENST00000447062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
WDTC1-203ENST00000447062 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
WDTC1-203ENST00000447062 CCER1Q8TC90 406 aaPredicted RBP19.64■□□□□ 0.73
WDTC1-203ENST00000447062 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
WDTC1-203ENST00000447062 DIEXFQ68CQ4 756 aaKnown RBP19.55■□□□□ 0.72
WDTC1-203ENST00000447062 MYT1Q01538 1121 aa19.51■□□□□ 0.71
WDTC1-203ENST00000447062 TTBK1Q5TCY1 1321 aaPredicted RBP19.5■□□□□ 0.71
WDTC1-203ENST00000447062 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
WDTC1-203ENST00000447062 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
WDTC1-203ENST00000447062 ABCC9O60706 1549 aa19.34■□□□□ 0.69
WDTC1-203ENST00000447062 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
WDTC1-203ENST00000447062 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
WDTC1-203ENST00000447062 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
WDTC1-203ENST00000447062 MIER1Q8N108 512 aa19.07■□□□□ 0.64
WDTC1-203ENST00000447062 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
WDTC1-203ENST00000447062 HNRNPUL2Q1KMD3 747 aaKnown RBP18.91■□□□□ 0.62
WDTC1-203ENST00000447062 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
WDTC1-203ENST00000447062 CEP162Q5TB80 1403 aa18.86■□□□□ 0.61
WDTC1-203ENST00000447062 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
WDTC1-203ENST00000447062 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.69e-6■■■■■ 50.1
WDTC1-203ENST00000447062 WIZO95785 1651 aa18.77■□□□□ 0.6
WDTC1-203ENST00000447062 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
WDTC1-203ENST00000447062 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
WDTC1-203ENST00000447062 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
WDTC1-203ENST00000447062 SOGA1O94964 1423 aa18.71■□□□□ 0.58
WDTC1-203ENST00000447062 TNIKQ9UKE5 1360 aa18.66■□□□□ 0.58
WDTC1-203ENST00000447062 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
WDTC1-203ENST00000447062 RANGAP1P46060 587 aaPredicted RBP18.63■□□□□ 0.57
WDTC1-203ENST00000447062 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
WDTC1-203ENST00000447062 TSHZ2Q9NRE2 1034 aa18.6■□□□□ 0.57
WDTC1-203ENST00000447062 ANP32EQ9BTT0 268 aa18.56■□□□□ 0.56
WDTC1-203ENST00000447062 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
WDTC1-203ENST00000447062 BCANQ96GW7 911 aa18.54■□□□□ 0.56
WDTC1-203ENST00000447062 APLP2Q06481 763 aa18.53■□□□□ 0.56
WDTC1-203ENST00000447062 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
WDTC1-203ENST00000447062 BCL11AQ9H165 835 aa18.5■□□□□ 0.55
WDTC1-203ENST00000447062 CLSPNQ9HAW4 1339 aa18.46■□□□□ 0.55
WDTC1-203ENST00000447062 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
WDTC1-203ENST00000447062 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
WDTC1-203ENST00000447062 CLIP1P30622 1438 aa18.38■□□□□ 0.53
WDTC1-203ENST00000447062 EEA1Q15075 1411 aa18.38■□□□□ 0.53
WDTC1-203ENST00000447062 NACADO15069 1562 aa18.33■□□□□ 0.53
WDTC1-203ENST00000447062 FKBP8Q14318 412 aa18.33■□□□□ 0.52
WDTC1-203ENST00000447062 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
WDTC1-203ENST00000447062 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
WDTC1-203ENST00000447062 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
WDTC1-203ENST00000447062 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
WDTC1-203ENST00000447062 ITGAEP38570 1179 aa18.26■□□□□ 0.51
WDTC1-203ENST00000447062 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
WDTC1-203ENST00000447062 RBM19Q9Y4C8 960 aaKnown RBP18.19■□□□□ 0.5
WDTC1-203ENST00000447062 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
WDTC1-203ENST00000447062 NEFLP07196 543 aa18.16■□□□□ 0.5
WDTC1-203ENST00000447062 DDX10Q13206 875 aaKnown RBP18.16■□□□□ 0.5
WDTC1-203ENST00000447062 RAPGEF2Q9Y4G8 1499 aa18.16■□□□□ 0.5
WDTC1-203ENST00000447062 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
WDTC1-203ENST00000447062 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
WDTC1-203ENST00000447062 KIF21BO75037 1637 aa18.1■□□□□ 0.49
WDTC1-203ENST00000447062 HIRIP3Q9BW71 556 aaPredicted RBP18.08■□□□□ 0.49
WDTC1-203ENST00000447062 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
WDTC1-203ENST00000447062 MSH5O43196 834 aa18.01■□□□□ 0.47
WDTC1-203ENST00000447062 BAZ1BQ9UIG0 1483 aaKnown RBP17.99■□□□□ 0.47
WDTC1-203ENST00000447062 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
WDTC1-203ENST00000447062 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
WDTC1-203ENST00000447062 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
WDTC1-203ENST00000447062 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
WDTC1-203ENST00000447062 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
WDTC1-203ENST00000447062 RAB3GAP2Q9H2M9 1393 aa17.92■□□□□ 0.46
WDTC1-203ENST00000447062 ANP32CO43423 234 aa17.91■□□□□ 0.46
WDTC1-203ENST00000447062 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
WDTC1-203ENST00000447062 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
WDTC1-203ENST00000447062 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
WDTC1-203ENST00000447062 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
WDTC1-203ENST00000447062 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.45
WDTC1-203ENST00000447062 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.45
WDTC1-203ENST00000447062 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
WDTC1-203ENST00000447062 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.44
WDTC1-203ENST00000447062 CCER2I3L3R5 266 aa17.78■□□□□ 0.44
WDTC1-203ENST00000447062 CUX2O14529 1486 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms