Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXP3Q9BZS1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 LINC02012-201ENST00000608206 1725 ntBASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXP3Q9BZS1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 AP002383.4-201ENST00000442518 975 ntBASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 AC002558.1-201ENST00000488906 803 ntBASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 MIR3180-1-201ENST00000580374 94 ntBASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 MIR3180-3-201ENST00000584616 94 ntBASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 AP002414.4-201ENST00000589764 1148 ntBASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 AL136038.4-201ENST00000603606 1261 ntBASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXP3Q9BZS1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms