Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 AL049757.1-201ENST00000616842 1596 ntBASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 AC092053.1-201ENST00000605787 1936 ntBASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
UPF3BQ9BZI7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UPF3BQ9BZI7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.77■□□□□ 0.91
UPF3BQ9BZI7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 KRT8P10-201ENST00000450021 1447 ntBASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.76■□□□□ 0.91
UPF3BQ9BZI7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 CHCHD2P8-201ENST00000429873 447 ntBASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 BX276092.5-203ENST00000456199 560 ntBASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.75■□□□□ 0.91
UPF3BQ9BZI7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms