Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 VENTXP5-201ENST00000523979 775 ntBASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 LINC01311-201ENST00000565162 1445 ntBASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 AL513477.1-201ENST00000602865 2407 ntBASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 IGHGP-201ENST00000390555 1178 ntBASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 DUX4L26-201ENST00000489078 1255 ntBASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRDL1Q9BU40 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 TSPY12P-201ENST00000421279 868 ntBASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 AC022616.7-201ENST00000525383 220 ntBASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRDL1Q9BU40 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRDL1Q9BU40 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms