Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 AC008677.1-201ENST00000519230 1561 ntBASIC17.96■□□□□ 0.47
CDCA3Q99618 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDCA3Q99618 AP000997.3-201ENST00000623333 2250 ntBASIC17.96■□□□□ 0.47
CDCA3Q99618 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.96■□□□□ 0.47
CDCA3Q99618 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDCA3Q99618 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.96■□□□□ 0.47
CDCA3Q99618 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.96■□□□□ 0.47
CDCA3Q99618 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDCA3Q99618 UGT1A2P-201ENST00000454886 866 ntBASIC17.96■□□□□ 0.47
CDCA3Q99618 AC069120.2-201ENST00000524091 540 ntBASIC17.96■□□□□ 0.47
CDCA3Q99618 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.96■□□□□ 0.47
CDCA3Q99618 AC027307.3-201ENST00000594262 1100 ntBASIC17.96■□□□□ 0.47
CDCA3Q99618 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CDCA3Q99618 FLJ13224-201ENST00000313737 1514 ntBASIC17.96■□□□□ 0.47
CDCA3Q99618 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.96■□□□□ 0.47
CDCA3Q99618 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.96■□□□□ 0.47
CDCA3Q99618 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.96■□□□□ 0.47
CDCA3Q99618 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDCA3Q99618 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDCA3Q99618 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.95■□□□□ 0.46
CDCA3Q99618 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.95■□□□□ 0.46
CDCA3Q99618 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDCA3Q99618 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDCA3Q99618 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDCA3Q99618 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDCA3Q99618 REXO1L9P-201ENST00000604264 2108 ntBASIC17.95■□□□□ 0.46
CDCA3Q99618 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDCA3Q99618 AC012569.1-201ENST00000591191 1524 ntBASIC17.95■□□□□ 0.46
CDCA3Q99618 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDCA3Q99618 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.95■□□□□ 0.46
CDCA3Q99618 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.95■□□□□ 0.46
CDCA3Q99618 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.95■□□□□ 0.46
CDCA3Q99618 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDCA3Q99618 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDCA3Q99618 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDCA3Q99618 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDCA3Q99618 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.95■□□□□ 0.46
CDCA3Q99618 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.95■□□□□ 0.46
CDCA3Q99618 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDCA3Q99618 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDCA3Q99618 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDCA3Q99618 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDCA3Q99618 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA3Q99618 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA3Q99618 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDCA3Q99618 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA3Q99618 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA3Q99618 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.94■□□□□ 0.46
CDCA3Q99618 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA3Q99618 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA3Q99618 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA3Q99618 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA3Q99618 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA3Q99618 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA3Q99618 LINC01451-201ENST00000623792 534 ntBASIC17.94■□□□□ 0.46
CDCA3Q99618 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDCA3Q99618 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.94■□□□□ 0.46
CDCA3Q99618 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA3Q99618 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA3Q99618 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA3Q99618 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms