Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL13Q99616 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL13Q99616 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCL13Q99616 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL13Q99616 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL13Q99616 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCL13Q99616 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.6□□□□□ -0.07
CCL13Q99616 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCL13Q99616 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL13Q99616 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL13Q99616 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCL13Q99616 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
CCL13Q99616 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
CCL13Q99616 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL13Q99616 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCL13Q99616 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL13Q99616 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CCL13Q99616 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL13Q99616 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.59□□□□□ -0.07
CCL13Q99616 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.59□□□□□ -0.07
CCL13Q99616 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.59□□□□□ -0.07
CCL13Q99616 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.59□□□□□ -0.07
CCL13Q99616 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL13Q99616 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.59□□□□□ -0.07
CCL13Q99616 AL355877.3-201ENST00000622820 899 ntBASIC14.59□□□□□ -0.07
CCL13Q99616 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL13Q99616 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL13Q99616 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL13Q99616 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CCL13Q99616 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL13Q99616 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCL13Q99616 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCL13Q99616 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCL13Q99616 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCL13Q99616 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCL13Q99616 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CCL13Q99616 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 AC046185.3-201ENST00000623228 1824 ntBASIC14.58□□□□□ -0.08
CCL13Q99616 AC004870.1-201ENST00000315132 882 ntBASIC14.58□□□□□ -0.08
CCL13Q99616 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL13Q99616 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
CCL13Q99616 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 AL020989.1-201ENST00000422979 469 ntBASIC14.58□□□□□ -0.08
CCL13Q99616 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL13Q99616 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL13Q99616 BX005266.1-201ENST00000473402 457 ntBASIC14.58□□□□□ -0.08
CCL13Q99616 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CCL13Q99616 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.58□□□□□ -0.08
CCL13Q99616 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.58□□□□□ -0.08
CCL13Q99616 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.58□□□□□ -0.08
CCL13Q99616 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL13Q99616 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.58□□□□□ -0.08
CCL13Q99616 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 AC106820.2-201ENST00000563775 3264 ntBASIC14.58□□□□□ -0.08
CCL13Q99616 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 AC009336.1-201ENST00000608941 1553 ntBASIC14.58□□□□□ -0.08
CCL13Q99616 AL138688.1-201ENST00000624851 1594 ntBASIC14.58□□□□□ -0.08
CCL13Q99616 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms