Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 SEC1P-202ENST00000473944 940 ntBASIC14.15□□□□□ -0.14
RAB40CQ96S21 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AC026471.5-201ENST00000615068 467 ntBASIC14.15□□□□□ -0.14
RAB40CQ96S21 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB40CQ96S21 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
RAB40CQ96S21 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 PVRIG2P-201ENST00000435460 978 ntBASIC14.14□□□□□ -0.15
RAB40CQ96S21 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 AC092865.7-201ENST00000641832 219 ntBASIC14.14□□□□□ -0.15
RAB40CQ96S21 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 AC092338.2-201ENST00000568827 1415 ntBASIC14.14□□□□□ -0.15
RAB40CQ96S21 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40CQ96S21 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40CQ96S21 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 CYP2T1P-202ENST00000641596 2535 ntBASIC14.13□□□□□ -0.15
RAB40CQ96S21 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 AC093525.9-201ENST00000624961 1746 ntBASIC14.13□□□□□ -0.15
RAB40CQ96S21 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms