Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG3Q8WXD2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG3Q8WXD2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SCG3Q8WXD2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG3Q8WXD2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG3Q8WXD2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.89■□□□□ 0.46
SCG3Q8WXD2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SCG3Q8WXD2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.89■□□□□ 0.46
SCG3Q8WXD2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.89■□□□□ 0.46
SCG3Q8WXD2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
SCG3Q8WXD2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SCG3Q8WXD2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 IFNL4P1-201ENST00000607083 540 ntBASIC17.89■□□□□ 0.45
SCG3Q8WXD2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SCG3Q8WXD2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 LINC00602-201ENST00000629776 2065 ntBASIC17.88■□□□□ 0.45
SCG3Q8WXD2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 KRT17P6-201ENST00000453795 1220 ntBASIC17.88■□□□□ 0.45
SCG3Q8WXD2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.88■□□□□ 0.45
SCG3Q8WXD2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 DDX43P3-201ENST00000441064 443 ntBASIC17.87■□□□□ 0.45
SCG3Q8WXD2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 KRT18P31-201ENST00000506277 1292 ntBASIC17.87■□□□□ 0.45
SCG3Q8WXD2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 AC099336.1-202ENST00000602961 463 ntBASIC17.87■□□□□ 0.45
SCG3Q8WXD2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCG3Q8WXD2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms