Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC008677.1-201ENST00000519230 1561 ntBASIC20.98■□□□□ 0.95
SNED1Q8TER0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNED1Q8TER0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.98■□□□□ 0.95
SNED1Q8TER0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNED1Q8TER0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNED1Q8TER0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SNED1Q8TER0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
SNED1Q8TER0 TREML5P-201ENST00000421694 576 ntBASIC20.98■□□□□ 0.95
SNED1Q8TER0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SNED1Q8TER0 AC026150.2-201ENST00000564693 1156 ntBASIC20.98■□□□□ 0.95
SNED1Q8TER0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.98■□□□□ 0.95
SNED1Q8TER0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.98■□□□□ 0.95
SNED1Q8TER0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.98■□□□□ 0.95
SNED1Q8TER0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNED1Q8TER0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.98■□□□□ 0.95
SNED1Q8TER0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNED1Q8TER0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNED1Q8TER0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNED1Q8TER0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNED1Q8TER0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 HMGA1P7-201ENST00000406908 502 ntBASIC20.97■□□□□ 0.95
SNED1Q8TER0 AC092580.3-201ENST00000430932 139 ntBASIC20.97■□□□□ 0.95
SNED1Q8TER0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNED1Q8TER0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SNED1Q8TER0 AC063926.2-201ENST00000623766 1308 ntBASIC20.96■□□□□ 0.95
SNED1Q8TER0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 RBPMS2P1-201ENST00000437762 623 ntBASIC20.96■□□□□ 0.95
SNED1Q8TER0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 MIR4515-201ENST00000584082 81 ntBASIC20.96■□□□□ 0.95
SNED1Q8TER0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.96■□□□□ 0.95
SNED1Q8TER0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SNED1Q8TER0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNED1Q8TER0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SNED1Q8TER0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SNED1Q8TER0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
SNED1Q8TER0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.95■□□□□ 0.95
SNED1Q8TER0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.95■□□□□ 0.95
SNED1Q8TER0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.95■□□□□ 0.95
SNED1Q8TER0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.95■□□□□ 0.95
SNED1Q8TER0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.95■□□□□ 0.95
SNED1Q8TER0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.95■□□□□ 0.95
SNED1Q8TER0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNED1Q8TER0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.95■□□□□ 0.94
SNED1Q8TER0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNED1Q8TER0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SNED1Q8TER0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNED1Q8TER0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNED1Q8TER0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.95■□□□□ 0.94
SNED1Q8TER0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.95■□□□□ 0.94
SNED1Q8TER0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNED1Q8TER0 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.95■□□□□ 0.94
SNED1Q8TER0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.95■□□□□ 0.94
SNED1Q8TER0 MRPS18AP1-201ENST00000414458 589 ntBASIC20.95■□□□□ 0.94
SNED1Q8TER0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNED1Q8TER0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms