Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 OR6D1P-203ENST00000641209 4860 ntBASIC14.23□□□□□ -0.13
LRTM2Q8N967 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 AC090192.1-201ENST00000517740 490 ntBASIC14.23□□□□□ -0.13
LRTM2Q8N967 FITM1-202ENST00000559294 800 ntBASIC14.23□□□□□ -0.13
LRTM2Q8N967 AC233702.5-201ENST00000584107 538 ntBASIC14.23□□□□□ -0.13
LRTM2Q8N967 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 AL049637.2-201ENST00000641778 930 ntBASIC14.23□□□□□ -0.13
LRTM2Q8N967 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.23□□□□□ -0.13
LRTM2Q8N967 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRTM2Q8N967 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 TSPY14P-201ENST00000303979 915 ntBASIC14.22□□□□□ -0.13
LRTM2Q8N967 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 C2orf69P3-201ENST00000565542 1120 ntBASIC14.22□□□□□ -0.13
LRTM2Q8N967 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
LRTM2Q8N967 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 EGFEM1P-202ENST00000431685 1563 ntBASIC14.22□□□□□ -0.13
LRTM2Q8N967 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRTM2Q8N967 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 TSPY12P-201ENST00000421279 868 ntBASIC14.21□□□□□ -0.13
LRTM2Q8N967 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 RBM17P1-201ENST00000453646 1190 ntBASIC14.21□□□□□ -0.13
LRTM2Q8N967 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRTM2Q8N967 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LRTM2Q8N967 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRTM2Q8N967 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.21□□□□□ -0.14
LRTM2Q8N967 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRTM2Q8N967 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRTM2Q8N967 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms