Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 KRT8P50-201ENST00000562022 1438 ntBASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 AC116353.5-201ENST00000638148 1699 ntBASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 AC022532.1-201ENST00000624563 1728 ntBASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 MIR149-201ENST00000384879 89 ntBASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.81■□□□□ 0.12
CROCCP3Q8IVE0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 AC004911.1-201ENST00000416316 871 ntBASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 AC087623.3-201ENST00000607047 1098 ntBASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 AL445675.2-201ENST00000620291 557 ntBASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CROCCP3Q8IVE0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms