Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 AC092053.1-201ENST00000605787 1936 ntBASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 AP000523.1-201ENST00000398242 1049 ntBASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 TSPY12P-201ENST00000421279 868 ntBASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 AC093525.9-201ENST00000624961 1746 ntBASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
NUDCD3Q8IVD9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 CYP2D8P-201ENST00000433633 1490 ntBASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUDCD3Q8IVD9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUDCD3Q8IVD9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUDCD3Q8IVD9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.3■□□□□ 0.36
NUDCD3Q8IVD9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
NUDCD3Q8IVD9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.3■□□□□ 0.36
NUDCD3Q8IVD9 AC079328.2-201ENST00000561241 3354 ntBASIC17.3■□□□□ 0.36
NUDCD3Q8IVD9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NUDCD3Q8IVD9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms