Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 PMPCAP1-201ENST00000508114 1576 ntBASIC18.06■□□□□ 0.48
LRRC38Q5VT99 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 MINOS1P3-201ENST00000457048 203 ntBASIC18.06■□□□□ 0.48
LRRC38Q5VT99 TOB2P1-201ENST00000469761 992 ntBASIC18.06■□□□□ 0.48
LRRC38Q5VT99 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 AC087388.1-201ENST00000571370 1112 ntBASIC18.06■□□□□ 0.48
LRRC38Q5VT99 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 AGGF1P2-201ENST00000426656 2106 ntBASIC18.05■□□□□ 0.48
LRRC38Q5VT99 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 POM121L3P-201ENST00000419331 1163 ntBASIC18.05■□□□□ 0.48
LRRC38Q5VT99 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 AC114341.1-201ENST00000618070 349 ntBASIC18.05■□□□□ 0.48
LRRC38Q5VT99 AP000550.4-202ENST00000639755 178 ntBASIC18.05■□□□□ 0.48
LRRC38Q5VT99 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LRRC38Q5VT99 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 RCN1P2-201ENST00000398357 915 ntBASIC18.04■□□□□ 0.48
LRRC38Q5VT99 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 MIR3180-1-201ENST00000580374 94 ntBASIC18.04■□□□□ 0.48
LRRC38Q5VT99 MIR3180-3-201ENST00000584616 94 ntBASIC18.04■□□□□ 0.48
LRRC38Q5VT99 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC38Q5VT99 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms