Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 AL513190.1-201ENST00000621254 727 ntBASIC18.4■□□□□ 0.54
VARS2Q5ST30 AC022726.2-201ENST00000634673 547 ntBASIC18.4■□□□□ 0.54
VARS2Q5ST30 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
VARS2Q5ST30 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VARS2Q5ST30 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
VARS2Q5ST30 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VARS2Q5ST30 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VARS2Q5ST30 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VARS2Q5ST30 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 SLC25A6P5-201ENST00000435663 894 ntBASIC18.39■□□□□ 0.53
VARS2Q5ST30 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 AC010507.1-201ENST00000633895 436 ntBASIC18.39■□□□□ 0.53
VARS2Q5ST30 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VARS2Q5ST30 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
VARS2Q5ST30 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 MIR3197-201ENST00000582241 73 ntBASIC18.38■□□□□ 0.53
VARS2Q5ST30 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 CFTRP2-201ENST00000634304 199 ntBASIC18.38■□□□□ 0.53
VARS2Q5ST30 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.38■□□□□ 0.53
VARS2Q5ST30 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARS2Q5ST30 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARS2Q5ST30 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 AC004967.1-201ENST00000453589 447 ntBASIC18.37■□□□□ 0.53
VARS2Q5ST30 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.37■□□□□ 0.53
VARS2Q5ST30 AC096734.2-201ENST00000562054 433 ntBASIC18.37■□□□□ 0.53
VARS2Q5ST30 RN7SL718P-201ENST00000581254 303 ntBASIC18.37■□□□□ 0.53
VARS2Q5ST30 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms