Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN20Q4JDL3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 HCG11-201ENST00000411553 5696 ntBASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 AC090340.1-201ENST00000620778 4980 ntBASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 SIGLEC30P-201ENST00000455569 941 ntBASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 AL355877.3-201ENST00000622820 899 ntBASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN20Q4JDL3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 FGFR3P6-201ENST00000457012 610 ntBASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 BX005266.1-201ENST00000473402 457 ntBASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 MTDHP3-201ENST00000594186 672 ntBASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN20Q4JDL3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms