Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 AL020989.1-201ENST00000422979 469 ntBASIC19.12■□□□□ 0.65
KCNA1Q09470 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNA1Q09470 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNA1Q09470 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.12■□□□□ 0.65
KCNA1Q09470 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNA1Q09470 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.12■□□□□ 0.65
KCNA1Q09470 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.12■□□□□ 0.65
KCNA1Q09470 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNA1Q09470 RN7SL510P-201ENST00000581311 263 ntBASIC19.12■□□□□ 0.65
KCNA1Q09470 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.12■□□□□ 0.65
KCNA1Q09470 NKAPP1-205ENST00000585790 367 ntBASIC19.12■□□□□ 0.65
KCNA1Q09470 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNA1Q09470 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
KCNA1Q09470 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA1Q09470 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA1Q09470 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA1Q09470 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA1Q09470 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA1Q09470 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA1Q09470 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA1Q09470 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA1Q09470 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KCNA1Q09470 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 AC116353.5-201ENST00000638148 1699 ntBASIC19.11■□□□□ 0.65
KCNA1Q09470 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA1Q09470 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.11■□□□□ 0.65
KCNA1Q09470 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNA1Q09470 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNA1Q09470 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNA1Q09470 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNA1Q09470 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA1Q09470 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
KCNA1Q09470 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA1Q09470 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.11■□□□□ 0.65
KCNA1Q09470 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA1Q09470 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNA1Q09470 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA1Q09470 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA1Q09470 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
KCNA1Q09470 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
KCNA1Q09470 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA1Q09470 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KCNA1Q09470 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KCNA1Q09470 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.1■□□□□ 0.65
KCNA1Q09470 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.1■□□□□ 0.65
KCNA1Q09470 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNA1Q09470 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNA1Q09470 AC079781.3-201ENST00000449110 356 ntBASIC19.1■□□□□ 0.65
KCNA1Q09470 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.1■□□□□ 0.65
KCNA1Q09470 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.1■□□□□ 0.65
KCNA1Q09470 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KCNA1Q09470 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KCNA1Q09470 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KCNA1Q09470 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNA1Q09470 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA1Q09470 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
KCNA1Q09470 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 AC016396.2-201ENST00000562575 1417 ntBASIC19.09■□□□□ 0.65
KCNA1Q09470 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
KCNA1Q09470 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA1Q09470 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
KCNA1Q09470 LINC01711-201ENST00000598340 967 ntBASIC19.09■□□□□ 0.65
KCNA1Q09470 TP73-AS1-207ENST00000624167 988 ntBASIC19.09■□□□□ 0.65
KCNA1Q09470 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms