Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN6P56747 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN6P56747 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN6P56747 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN6P56747 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN6P56747 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN6P56747 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN6P56747 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLDN6P56747 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN6P56747 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN6P56747 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN6P56747 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 AC023141.5-201ENST00000458585 616 ntBASIC16.66■□□□□ 0.26
CLDN6P56747 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 CXCL1P1-201ENST00000502804 216 ntBASIC16.66■□□□□ 0.26
CLDN6P56747 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN6P56747 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN6P56747 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN6P56747 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN6P56747 AC009336.1-201ENST00000608941 1553 ntBASIC16.66■□□□□ 0.26
CLDN6P56747 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLDN6P56747 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLDN6P56747 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN6P56747 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CLDN6P56747 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN6P56747 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLDN6P56747 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CLDN6P56747 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN6P56747 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN6P56747 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN6P56747 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN6P56747 TIMM8BP1-201ENST00000452384 211 ntBASIC16.65■□□□□ 0.26
CLDN6P56747 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN6P56747 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN6P56747 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN6P56747 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN6P56747 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN6P56747 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CLDN6P56747 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN6P56747 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN6P56747 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN6P56747 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN6P56747 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLDN6P56747 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
CLDN6P56747 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLDN6P56747 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN6P56747 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN6P56747 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN6P56747 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN6P56747 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN6P56747 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.64■□□□□ 0.25
CLDN6P56747 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN6P56747 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN6P56747 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN6P56747 AC025678.2-201ENST00000562061 970 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms