Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN15P56746 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN15P56746 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN15P56746 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN15P56746 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN15P56746 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN15P56746 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN15P56746 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDN15P56746 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN15P56746 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN15P56746 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.65■□□□□ 0.1
CLDN15P56746 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLDN15P56746 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDN15P56746 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN15P56746 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN15P56746 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN15P56746 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 LETM1P2-201ENST00000597330 2178 ntBASIC15.65■□□□□ 0.1
CLDN15P56746 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN15P56746 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.64■□□□□ 0.1
CLDN15P56746 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN15P56746 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN15P56746 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLDN15P56746 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN15P56746 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
CLDN15P56746 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN15P56746 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN15P56746 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN15P56746 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN15P56746 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CLDN15P56746 AC139887.3-201ENST00000568585 713 ntBASIC15.64■□□□□ 0.09
CLDN15P56746 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN15P56746 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.64■□□□□ 0.09
CLDN15P56746 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CLDN15P56746 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN15P56746 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN15P56746 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN15P56746 AL139327.4-201ENST00000612362 153 ntBASIC15.64■□□□□ 0.09
CLDN15P56746 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CLDN15P56746 BX640515.1-201ENST00000617215 977 ntBASIC15.64■□□□□ 0.09
CLDN15P56746 AC008735.5-201ENST00000623544 497 ntBASIC15.64■□□□□ 0.09
CLDN15P56746 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLDN15P56746 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 IL9RP2-201ENST00000423948 1312 ntBASIC15.64■□□□□ 0.09
CLDN15P56746 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN15P56746 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CLDN15P56746 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CLDN15P56746 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN15P56746 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 AC133963.1-201ENST00000504166 1679 ntBASIC15.63■□□□□ 0.09
CLDN15P56746 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLDN15P56746 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 GNAS-203ENST00000306120 1878 ntBASIC15.63■□□□□ 0.09
CLDN15P56746 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CLDN15P56746 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN15P56746 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CLDN15P56746 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN15P56746 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN15P56746 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN15P56746 AL590627.1-203ENST00000421194 1026 ntBASIC15.63■□□□□ 0.09
CLDN15P56746 LAGE3P1-201ENST00000425356 484 ntBASIC15.63■□□□□ 0.09
CLDN15P56746 KRT18P27-201ENST00000427733 1299 ntBASIC15.63■□□□□ 0.09
CLDN15P56746 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN15P56746 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN15P56746 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN15P56746 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms