Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB5CP51148 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB5CP51148 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RAB5CP51148 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RAB5CP51148 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RAB5CP51148 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RAB5CP51148 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RAB5CP51148 HLA-B-256ENST00000639848 1089 ntBASIC14.03□□□□□ -0.16
RAB5CP51148 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB5CP51148 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
RAB5CP51148 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB5CP51148 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB5CP51148 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB5CP51148 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 AC046185.3-201ENST00000623228 1824 ntBASIC14.03□□□□□ -0.16
RAB5CP51148 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RAB5CP51148 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB5CP51148 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RAB5CP51148 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RAB5CP51148 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5CP51148 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RAB5CP51148 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RAB5CP51148 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB5CP51148 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 AL024508.2-201ENST00000607749 1894 ntBASIC14.02□□□□□ -0.16
RAB5CP51148 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RAB5CP51148 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB5CP51148 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5CP51148 AC132938.6-201ENST00000623828 1655 ntBASIC14.02□□□□□ -0.16
RAB5CP51148 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB5CP51148 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB5CP51148 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB5CP51148 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB5CP51148 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
RAB5CP51148 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB5CP51148 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB5CP51148 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB5CP51148 CKBP1-201ENST00000565489 1086 ntBASIC14.02□□□□□ -0.17
RAB5CP51148 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB5CP51148 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB5CP51148 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB5CP51148 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB5CP51148 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB5CP51148 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB5CP51148 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5CP51148 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAB5CP51148 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAB5CP51148 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms