Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CBX5P45973 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.05■□□□□ 0
CBX5P45973 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.05■□□□□ 0
CBX5P45973 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CBX5P45973 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.05■□□□□ 0
CBX5P45973 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.05■□□□□ 0
CBX5P45973 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.05■□□□□ 0
CBX5P45973 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
CBX5P45973 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.05■□□□□ -0
CBX5P45973 AC128676.1-201ENST00000454392 318 ntBASIC15.05■□□□□ -0
CBX5P45973 AP003041.3-201ENST00000527151 707 ntBASIC15.05■□□□□ -0
CBX5P45973 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
CBX5P45973 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.05■□□□□ -0
CBX5P45973 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CBX5P45973 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.05■□□□□ -0
CBX5P45973 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.05■□□□□ -0
CBX5P45973 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.05■□□□□ -0
CBX5P45973 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.05■□□□□ -0
CBX5P45973 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
CBX5P45973 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CBX5P45973 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CBX5P45973 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CBX5P45973 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CBX5P45973 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.04■□□□□ -0
CBX5P45973 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CBX5P45973 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CBX5P45973 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.04■□□□□ -0
CBX5P45973 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.04■□□□□ -0
CBX5P45973 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.04■□□□□ -0
CBX5P45973 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.04■□□□□ -0
CBX5P45973 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.04■□□□□ -0
CBX5P45973 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.04■□□□□ -0
CBX5P45973 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.04■□□□□ -0
CBX5P45973 AL353719.1-201ENST00000566847 864 ntBASIC15.04■□□□□ -0
CBX5P45973 AP005242.2-201ENST00000580065 1175 ntBASIC15.04■□□□□ -0
CBX5P45973 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
CBX5P45973 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.04■□□□□ -0
CBX5P45973 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CBX5P45973 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CBX5P45973 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CBX5P45973 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CBX5P45973 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.03■□□□□ -0
CBX5P45973 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.03■□□□□ -0
CBX5P45973 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CBX5P45973 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.03■□□□□ -0
CBX5P45973 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.03■□□□□ -0
CBX5P45973 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CBX5P45973 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.03■□□□□ -0
CBX5P45973 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CBX5P45973 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms