Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.72■■□□□ 1.07
RFC4P35249 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.72■■□□□ 1.07
RFC4P35249 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.72■■□□□ 1.07
RFC4P35249 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.72■■□□□ 1.07
RFC4P35249 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.72■■□□□ 1.07
RFC4P35249 IGHV3-62-201ENST00000520057 340 ntBASIC21.72■■□□□ 1.07
RFC4P35249 SLC25A39P2-201ENST00000537614 270 ntBASIC21.72■■□□□ 1.07
RFC4P35249 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.72■■□□□ 1.07
RFC4P35249 AC140878.1-201ENST00000565277 250 ntBASIC21.72■■□□□ 1.07
RFC4P35249 MIR4515-201ENST00000584082 81 ntBASIC21.72■■□□□ 1.07
RFC4P35249 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC4P35249 AL161645.1-201ENST00000622716 1255 ntBASIC21.72■■□□□ 1.07
RFC4P35249 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC4P35249 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC4P35249 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RFC4P35249 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC4P35249 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFC4P35249 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFC4P35249 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC4P35249 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFC4P35249 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC4P35249 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC4P35249 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.71■■□□□ 1.07
RFC4P35249 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.71■■□□□ 1.07
RFC4P35249 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RFC4P35249 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RFC4P35249 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC4P35249 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC4P35249 FAM207CP-201ENST00000443486 507 ntBASIC21.71■■□□□ 1.07
RFC4P35249 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.71■■□□□ 1.07
RFC4P35249 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.71■■□□□ 1.07
RFC4P35249 IGHV3-42-201ENST00000520410 361 ntBASIC21.71■■□□□ 1.07
RFC4P35249 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RFC4P35249 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.71■■□□□ 1.07
RFC4P35249 LINC02560-201ENST00000596379 459 ntBASIC21.71■■□□□ 1.07
RFC4P35249 AL390754.1-201ENST00000619088 582 ntBASIC21.71■■□□□ 1.07
RFC4P35249 AC008761.3-201ENST00000624803 892 ntBASIC21.71■■□□□ 1.07
RFC4P35249 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.71■■□□□ 1.07
RFC4P35249 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.71■■□□□ 1.07
RFC4P35249 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC4P35249 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC4P35249 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC4P35249 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.71■■□□□ 1.07
RFC4P35249 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC4P35249 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFC4P35249 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RFC4P35249 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.7■■□□□ 1.07
RFC4P35249 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 AC008677.1-201ENST00000519230 1561 ntBASIC21.7■■□□□ 1.06
RFC4P35249 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.7■■□□□ 1.06
RFC4P35249 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RFC4P35249 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.7■■□□□ 1.06
RFC4P35249 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.7■■□□□ 1.06
RFC4P35249 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.7■■□□□ 1.06
RFC4P35249 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.7■■□□□ 1.06
RFC4P35249 AC026150.2-201ENST00000564693 1156 ntBASIC21.7■■□□□ 1.06
RFC4P35249 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.7■■□□□ 1.06
RFC4P35249 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.7■■□□□ 1.06
RFC4P35249 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.7■■□□□ 1.06
RFC4P35249 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.7■■□□□ 1.06
RFC4P35249 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.7■■□□□ 1.06
RFC4P35249 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC4P35249 UXT-AS1-201ENST00000590504 1525 ntBASIC21.7■■□□□ 1.06
RFC4P35249 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.69■■□□□ 1.06
RFC4P35249 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.69■■□□□ 1.06
RFC4P35249 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC4P35249 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC4P35249 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC4P35249 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC4P35249 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
RFC4P35249 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC4P35249 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.69■■□□□ 1.06
RFC4P35249 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.69■■□□□ 1.06
RFC4P35249 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.69■■□□□ 1.06
RFC4P35249 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.69■■□□□ 1.06
RFC4P35249 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.69■■□□□ 1.06
RFC4P35249 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.69■■□□□ 1.06
RFC4P35249 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.69■■□□□ 1.06
RFC4P35249 WIZP1-201ENST00000531444 2299 ntBASIC21.69■■□□□ 1.06
RFC4P35249 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.69■■□□□ 1.06
RFC4P35249 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RFC4P35249 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC4P35249 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC4P35249 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms