Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CSF1RP07333 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.27■□□□□ 0.99
CSF1RP07333 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CSF1RP07333 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.26■□□□□ 0.99
CSF1RP07333 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.26■□□□□ 0.99
CSF1RP07333 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.26■□□□□ 0.99
CSF1RP07333 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.26■□□□□ 0.99
CSF1RP07333 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.26■□□□□ 0.99
CSF1RP07333 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.26■□□□□ 0.99
CSF1RP07333 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.26■□□□□ 0.99
CSF1RP07333 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.26■□□□□ 0.99
CSF1RP07333 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CSF1RP07333 AP002472.1-201ENST00000577490 586 ntBASIC21.26■□□□□ 0.99
CSF1RP07333 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.26■□□□□ 0.99
CSF1RP07333 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.26■□□□□ 0.99
CSF1RP07333 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.26■□□□□ 0.99
CSF1RP07333 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSF1RP07333 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CSF1RP07333 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.25■□□□□ 0.99
CSF1RP07333 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.25■□□□□ 0.99
CSF1RP07333 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 AC254562.1-201ENST00000417586 456 ntBASIC21.25■□□□□ 0.99
CSF1RP07333 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.25■□□□□ 0.99
CSF1RP07333 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
CSF1RP07333 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.25■□□□□ 0.99
CSF1RP07333 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.25■□□□□ 0.99
CSF1RP07333 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.25■□□□□ 0.99
CSF1RP07333 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.25■□□□□ 0.99
CSF1RP07333 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
CSF1RP07333 AL138688.1-201ENST00000624851 1594 ntBASIC21.25■□□□□ 0.99
CSF1RP07333 AC092902.6-201ENST00000641783 218 ntBASIC21.25■□□□□ 0.99
CSF1RP07333 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.25■□□□□ 0.99
CSF1RP07333 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.25■□□□□ 0.99
CSF1RP07333 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CSF1RP07333 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CSF1RP07333 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.25■□□□□ 0.99
CSF1RP07333 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSF1RP07333 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CSF1RP07333 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CSF1RP07333 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.24■□□□□ 0.99
CSF1RP07333 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.24■□□□□ 0.99
CSF1RP07333 AL513480.1-201ENST00000451731 511 ntBASIC21.24■□□□□ 0.99
CSF1RP07333 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CSF1RP07333 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.24■□□□□ 0.99
CSF1RP07333 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.24■□□□□ 0.99
CSF1RP07333 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.24■□□□□ 0.99
CSF1RP07333 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSF1RP07333 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.24■□□□□ 0.99
CSF1RP07333 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.23■□□□□ 0.99
CSF1RP07333 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.23■□□□□ 0.99
CSF1RP07333 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 FAM58CP-201ENST00000435741 640 ntBASIC21.23■□□□□ 0.99
CSF1RP07333 CEND1P1-201ENST00000451006 455 ntBASIC21.23■□□□□ 0.99
CSF1RP07333 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.23■□□□□ 0.99
CSF1RP07333 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.23■□□□□ 0.99
CSF1RP07333 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.23■□□□□ 0.99
CSF1RP07333 AC091812.2-201ENST00000619081 385 ntBASIC21.23■□□□□ 0.99
CSF1RP07333 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.23■□□□□ 0.99
CSF1RP07333 NOC2LP2-201ENST00000407594 1944 ntBASIC21.23■□□□□ 0.99
CSF1RP07333 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.23■□□□□ 0.99
CSF1RP07333 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSF1RP07333 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms