Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 SIGLEC30P-201ENST00000455569 941 ntBASIC17.65■□□□□ 0.42
HLA-DQB2P05538 BX005266.1-201ENST00000473402 457 ntBASIC17.65■□□□□ 0.42
HLA-DQB2P05538 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 MTDHP3-201ENST00000594186 672 ntBASIC17.65■□□□□ 0.42
HLA-DQB2P05538 AC008608.2-201ENST00000606089 416 ntBASIC17.65■□□□□ 0.42
HLA-DQB2P05538 AL355877.3-201ENST00000622820 899 ntBASIC17.65■□□□□ 0.42
HLA-DQB2P05538 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DQB2P05538 AC080080.1-201ENST00000625121 2420 ntBASIC17.64■□□□□ 0.42
HLA-DQB2P05538 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-DQB2P05538 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 AC093525.9-201ENST00000624961 1746 ntBASIC17.64■□□□□ 0.41
HLA-DQB2P05538 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 FGFR3P6-201ENST00000457012 610 ntBASIC17.64■□□□□ 0.41
HLA-DQB2P05538 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.64■□□□□ 0.41
HLA-DQB2P05538 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB2P05538 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 SAPCD2P3-201ENST00000455031 850 ntBASIC17.63■□□□□ 0.41
HLA-DQB2P05538 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 AF238378.1-201ENST00000526806 358 ntBASIC17.63■□□□□ 0.41
HLA-DQB2P05538 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 NKAPP1-205ENST00000585790 367 ntBASIC17.63■□□□□ 0.41
HLA-DQB2P05538 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB2P05538 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DQB2P05538 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms