Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DRAP01903 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HLA-DRAP01903 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.72■□□□□ 0.59
HLA-DRAP01903 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DRAP01903 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DRAP01903 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DRAP01903 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HLA-DRAP01903 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRAP01903 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.71■□□□□ 0.58
HLA-DRAP01903 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 RN7SL510P-201ENST00000581311 263 ntBASIC18.7■□□□□ 0.58
HLA-DRAP01903 AL691432.3-201ENST00000621860 400 ntBASIC18.7■□□□□ 0.58
HLA-DRAP01903 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DRAP01903 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRAP01903 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 PRYP5-201ENST00000451909 266 ntBASIC18.69■□□□□ 0.58
HLA-DRAP01903 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 AL022326.1-202ENST00000641533 845 ntBASIC18.69■□□□□ 0.58
HLA-DRAP01903 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms