Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST1O76090 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST1O76090 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST1O76090 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 UNC93B6-202ENST00000528242 690 ntBASIC18.24■□□□□ 0.51
BEST1O76090 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST1O76090 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST1O76090 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
BEST1O76090 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST1O76090 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
BEST1O76090 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 AC104109.2-201ENST00000602919 1418 ntBASIC18.23■□□□□ 0.51
BEST1O76090 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST1O76090 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST1O76090 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST1O76090 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST1O76090 AC141586.5-201ENST00000624546 2050 ntBASIC18.23■□□□□ 0.51
BEST1O76090 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST1O76090 SLC25A1P3-201ENST00000395415 828 ntBASIC18.23■□□□□ 0.51
BEST1O76090 PTCHD3P3-201ENST00000403073 906 ntBASIC18.23■□□□□ 0.51
BEST1O76090 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.23■□□□□ 0.51
BEST1O76090 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST1O76090 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST1O76090 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST1O76090 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
BEST1O76090 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BEST1O76090 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST1O76090 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
BEST1O76090 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST1O76090 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BEST1O76090 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
BEST1O76090 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 AC034105.1-201ENST00000563488 319 ntBASIC18.22■□□□□ 0.51
BEST1O76090 AC145285.3-201ENST00000564603 959 ntBASIC18.22■□□□□ 0.51
BEST1O76090 AC106730.1-201ENST00000566722 1090 ntBASIC18.22■□□□□ 0.51
BEST1O76090 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.22■□□□□ 0.51
BEST1O76090 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.22■□□□□ 0.51
BEST1O76090 MIR1199-201ENST00000621445 119 ntBASIC18.22■□□□□ 0.51
BEST1O76090 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
BEST1O76090 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.22■□□□□ 0.51
BEST1O76090 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
BEST1O76090 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
BEST1O76090 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST1O76090 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 GPR89P-201ENST00000407924 1495 ntBASIC18.21■□□□□ 0.51
BEST1O76090 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
BEST1O76090 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST1O76090 AC139713.2-201ENST00000641328 2723 ntBASIC18.21■□□□□ 0.51
BEST1O76090 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms