Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
LDB2O43679 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB2O43679 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.4■□□□□ 0.38
LDB2O43679 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB2O43679 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB2O43679 AL020989.1-201ENST00000422979 469 ntBASIC17.4■□□□□ 0.38
LDB2O43679 DUSP5P1-201ENST00000441325 1139 ntBASIC17.4■□□□□ 0.38
LDB2O43679 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB2O43679 AC106795.1-205ENST00000512851 1056 ntBASIC17.4■□□□□ 0.38
LDB2O43679 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.4■□□□□ 0.38
LDB2O43679 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB2O43679 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.4■□□□□ 0.38
LDB2O43679 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.4■□□□□ 0.38
LDB2O43679 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.4■□□□□ 0.38
LDB2O43679 AL121894.2-201ENST00000602977 491 ntBASIC17.4■□□□□ 0.38
LDB2O43679 AL121772.3-201ENST00000610840 674 ntBASIC17.4■□□□□ 0.38
LDB2O43679 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LDB2O43679 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB2O43679 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB2O43679 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB2O43679 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LDB2O43679 AC079776.2-201ENST00000641154 1609 ntBASIC17.39■□□□□ 0.38
LDB2O43679 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
LDB2O43679 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.39■□□□□ 0.38
LDB2O43679 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LDB2O43679 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.39■□□□□ 0.37
LDB2O43679 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LDB2O43679 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.39■□□□□ 0.37
LDB2O43679 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.39■□□□□ 0.37
LDB2O43679 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.39■□□□□ 0.37
LDB2O43679 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.39■□□□□ 0.37
LDB2O43679 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.39■□□□□ 0.37
LDB2O43679 PRELID1P1-202ENST00000567272 903 ntBASIC17.39■□□□□ 0.37
LDB2O43679 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.39■□□□□ 0.37
LDB2O43679 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.39■□□□□ 0.37
LDB2O43679 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.39■□□□□ 0.37
LDB2O43679 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.39■□□□□ 0.37
LDB2O43679 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.39■□□□□ 0.37
LDB2O43679 AC012313.10-201ENST00000623509 926 ntBASIC17.39■□□□□ 0.37
LDB2O43679 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LDB2O43679 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LDB2O43679 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LDB2O43679 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LDB2O43679 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB2O43679 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.39■□□□□ 0.37
LDB2O43679 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LDB2O43679 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 LINC02012-201ENST00000608206 1725 ntBASIC17.38■□□□□ 0.37
LDB2O43679 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.38■□□□□ 0.37
LDB2O43679 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.38■□□□□ 0.37
LDB2O43679 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LDB2O43679 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB2O43679 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms