Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM6-TRIM34B2RNG4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM6-TRIM34B2RNG4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM6-TRIM34B2RNG4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM6-TRIM34B2RNG4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM6-TRIM34B2RNG4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM6-TRIM34B2RNG4 INTS4P1-201ENST00000438455 1935 ntBASIC21.33■■□□□ 1
TRIM6-TRIM34B2RNG4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 AP001094.4-201ENST00000579008 2176 ntBASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 NUS1P2-201ENST00000417358 873 ntBASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 AC138894.3-201ENST00000603787 634 ntBASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM6-TRIM34B2RNG4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM6-TRIM34B2RNG4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 AC016396.2-201ENST00000562575 1417 ntBASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 AC046185.3-201ENST00000623228 1824 ntBASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 HCG4P8-203ENST00000443049 980 ntBASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 AC114341.1-201ENST00000618070 349 ntBASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 AL353593.2-201ENST00000602529 1483 ntBASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM6-TRIM34B2RNG4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms