Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 SLC25A1P3-201ENST00000395415 828 ntBASIC14.04□□□□□ -0.16
SRRM4A7MD48 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 AC103564.2-201ENST00000432853 1299 ntBASIC14.04□□□□□ -0.16
SRRM4A7MD48 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SRRM4A7MD48 AC046185.3-201ENST00000623228 1824 ntBASIC14.04□□□□□ -0.16
SRRM4A7MD48 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.04□□□□□ -0.16
SRRM4A7MD48 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 AP002383.4-201ENST00000442518 975 ntBASIC14.03□□□□□ -0.16
SRRM4A7MD48 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 TSSC2-201ENST00000450217 709 ntBASIC14.03□□□□□ -0.16
SRRM4A7MD48 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 AC087388.1-201ENST00000571370 1112 ntBASIC14.03□□□□□ -0.16
SRRM4A7MD48 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 AL590326.2-201ENST00000625139 305 ntBASIC14.03□□□□□ -0.16
SRRM4A7MD48 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 KRT18P1-202ENST00000452408 1331 ntBASIC14.03□□□□□ -0.16
SRRM4A7MD48 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 AC093525.9-201ENST00000624961 1746 ntBASIC14.03□□□□□ -0.16
SRRM4A7MD48 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SRRM4A7MD48 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 AC084018.2-201ENST00000613093 2607 ntBASIC14.03□□□□□ -0.16
SRRM4A7MD48 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRRM4A7MD48 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SRRM4A7MD48 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SRRM4A7MD48 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRRM4A7MD48 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.02□□□□□ -0.16
SRRM4A7MD48 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 AC009533.2-201ENST00000543664 586 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms