Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC107956.1-201ENST00000494359 873 ntBASIC15.19■□□□□ 0.02
SHISA3A0PJX4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 AC116562.4-202ENST00000641738 218 ntBASIC15.19■□□□□ 0.02
SHISA3A0PJX4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 AL390955.1-201ENST00000428694 934 ntBASIC15.18■□□□□ 0.02
SHISA3A0PJX4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 RBM17P1-201ENST00000453646 1190 ntBASIC15.18■□□□□ 0.02
SHISA3A0PJX4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 AC026471.5-201ENST00000615068 467 ntBASIC15.18■□□□□ 0.02
SHISA3A0PJX4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 HLA-A-202ENST00000376806 1854 ntBASIC15.18■□□□□ 0.02
SHISA3A0PJX4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 AL365203.3-201ENST00000609742 2057 ntBASIC15.18■□□□□ 0.02
SHISA3A0PJX4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHISA3A0PJX4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 AC010653.2-201ENST00000623505 997 ntBASIC15.17■□□□□ 0.02
SHISA3A0PJX4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 AC092865.7-201ENST00000641832 219 ntBASIC15.17■□□□□ 0.02
SHISA3A0PJX4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SHISA3A0PJX4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms