Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 KRT18P31-201ENST00000506277 1292 ntBASIC17.52■□□□□ 0.4
PKP3Q9Y446 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.52■□□□□ 0.4
PKP3Q9Y446 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP3Q9Y446 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PKP3Q9Y446 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PKP3Q9Y446 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 AC003669.1-201ENST00000334569 611 ntBASIC17.51■□□□□ 0.39
PKP3Q9Y446 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 KLF4P1-201ENST00000412782 1185 ntBASIC17.51■□□□□ 0.39
PKP3Q9Y446 TSPY19P-201ENST00000418461 509 ntBASIC17.51■□□□□ 0.39
PKP3Q9Y446 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 TSPY18P-201ENST00000441642 509 ntBASIC17.51■□□□□ 0.39
PKP3Q9Y446 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 ABCD1P5-201ENST00000445663 754 ntBASIC17.51■□□□□ 0.39
PKP3Q9Y446 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 STK25P1-201ENST00000585406 838 ntBASIC17.51■□□□□ 0.39
PKP3Q9Y446 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 AC073592.5-201ENST00000624854 528 ntBASIC17.51■□□□□ 0.39
PKP3Q9Y446 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP3Q9Y446 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PKP3Q9Y446 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 STK19B-204ENST00000512515 211 ntBASIC17.5■□□□□ 0.39
PKP3Q9Y446 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 AL732292.2-201ENST00000609649 430 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms