Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC22CQ9BRL7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 AC144831.1-201ENST00000573312 2656 ntBASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC22CQ9BRL7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 AC008040.2-201ENST00000461049 708 ntBASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 AC011298.2-201ENST00000617989 482 ntBASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC22CQ9BRL7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 MIR663A-201ENST00000385250 93 ntBASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 MIR3180-5-201ENST00000583743 153 ntBASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SEC22CQ9BRL7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC22CQ9BRL7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC22CQ9BRL7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC22CQ9BRL7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms