Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 AC138649.4-201ENST00000612222 287 ntBASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 AC093503.3-201ENST00000624917 2352 ntBASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 HMGA1P7-201ENST00000406908 502 ntBASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 PMS2P4-201ENST00000412466 1052 ntBASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 AL161645.1-201ENST00000622716 1255 ntBASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRAMP1Q96RY5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 LINC01225-203ENST00000563550 1244 ntBASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 AC138028.4-201ENST00000564984 1845 ntBASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CRAMP1Q96RY5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 TUBB3P1-201ENST00000405796 1332 ntBASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 SPCS2P4-201ENST00000436160 681 ntBASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.11■□□□□ 0.97
CRAMP1Q96RY5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRAMP1Q96RY5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CRAMP1Q96RY5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRAMP1Q96RY5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRAMP1Q96RY5 AC090164.3-201ENST00000610780 2143 ntBASIC21.1■□□□□ 0.97
CRAMP1Q96RY5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRAMP1Q96RY5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms