Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.03■□□□□ -0
CMTM3Q96MX0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CMTM3Q96MX0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CMTM3Q96MX0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.03■□□□□ -0
CMTM3Q96MX0 AC105917.1-201ENST00000506637 2539 ntBASIC15.03■□□□□ -0
CMTM3Q96MX0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMTM3Q96MX0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.03■□□□□ -0
CMTM3Q96MX0 AC068418.2-201ENST00000577309 3703 ntBASIC15.03■□□□□ -0
CMTM3Q96MX0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CMTM3Q96MX0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMTM3Q96MX0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.03■□□□□ -0
CMTM3Q96MX0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMTM3Q96MX0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CMTM3Q96MX0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.02■□□□□ -0
CMTM3Q96MX0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CMTM3Q96MX0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.02■□□□□ -0
CMTM3Q96MX0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CMTM3Q96MX0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 AL135905.2-201ENST00000584934 1404 ntBASIC15.02■□□□□ -0
CMTM3Q96MX0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.02■□□□□ -0
CMTM3Q96MX0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CMTM3Q96MX0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.02■□□□□ -0
CMTM3Q96MX0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CMTM3Q96MX0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMTM3Q96MX0 RNA5SP413-201ENST00000516373 109 ntBASIC15.02■□□□□ -0
CMTM3Q96MX0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.02■□□□□ -0
CMTM3Q96MX0 AP002490.2-201ENST00000524791 560 ntBASIC15.02■□□□□ -0
CMTM3Q96MX0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CMTM3Q96MX0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 BX088651.1-201ENST00000540551 451 ntBASIC15.01□□□□□ -0.01
CMTM3Q96MX0 MIR3917-201ENST00000580971 93 ntBASIC15.01□□□□□ -0.01
CMTM3Q96MX0 CD177P1-201ENST00000606252 935 ntBASIC15.01□□□□□ -0.01
CMTM3Q96MX0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.01□□□□□ -0.01
CMTM3Q96MX0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15□□□□□ -0.01
CMTM3Q96MX0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15□□□□□ -0.01
CMTM3Q96MX0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CMTM3Q96MX0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CMTM3Q96MX0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15□□□□□ -0.01
CMTM3Q96MX0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CMTM3Q96MX0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CMTM3Q96MX0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CMTM3Q96MX0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 MYCLP1-201ENST00000372451 1075 ntBASIC15□□□□□ -0.01
CMTM3Q96MX0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15□□□□□ -0.01
CMTM3Q96MX0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15□□□□□ -0.01
CMTM3Q96MX0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CMTM3Q96MX0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15□□□□□ -0.01
CMTM3Q96MX0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms