Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 DDX43P3-201ENST00000441064 443 ntBASIC18.01■□□□□ 0.47
IFT43Q96FT9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 OR6D1P-203ENST00000641209 4860 ntBASIC18■□□□□ 0.47
IFT43Q96FT9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18■□□□□ 0.47
IFT43Q96FT9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
IFT43Q96FT9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
IFT43Q96FT9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18■□□□□ 0.47
IFT43Q96FT9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18■□□□□ 0.47
IFT43Q96FT9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18■□□□□ 0.47
IFT43Q96FT9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18■□□□□ 0.47
IFT43Q96FT9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18■□□□□ 0.47
IFT43Q96FT9 KRT16P4-201ENST00000453883 522 ntBASIC18■□□□□ 0.47
IFT43Q96FT9 EMBP1-201ENST00000458200 901 ntBASIC18■□□□□ 0.47
IFT43Q96FT9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18■□□□□ 0.47
IFT43Q96FT9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18■□□□□ 0.47
IFT43Q96FT9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18■□□□□ 0.47
IFT43Q96FT9 AL160237.2-201ENST00000556165 472 ntBASIC18■□□□□ 0.47
IFT43Q96FT9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18■□□□□ 0.47
IFT43Q96FT9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18■□□□□ 0.47
IFT43Q96FT9 AL353801.3-201ENST00000609898 542 ntBASIC18■□□□□ 0.47
IFT43Q96FT9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18■□□□□ 0.47
IFT43Q96FT9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
IFT43Q96FT9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
IFT43Q96FT9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
IFT43Q96FT9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
IFT43Q96FT9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18■□□□□ 0.47
IFT43Q96FT9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18■□□□□ 0.47
IFT43Q96FT9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.99■□□□□ 0.47
IFT43Q96FT9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 AC099336.1-202ENST00000602961 463 ntBASIC17.99■□□□□ 0.47
IFT43Q96FT9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IFT43Q96FT9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
IFT43Q96FT9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 AL356309.3-201ENST00000624132 1934 ntBASIC17.98■□□□□ 0.47
IFT43Q96FT9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms