Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC027307.3-201ENST00000594262 1100 ntBASIC17.27■□□□□ 0.36
CLDN23Q96B33 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN23Q96B33 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN23Q96B33 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN23Q96B33 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN23Q96B33 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CLDN23Q96B33 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CLDN23Q96B33 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CLDN23Q96B33 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.27■□□□□ 0.35
CLDN23Q96B33 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN23Q96B33 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN23Q96B33 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CLDN23Q96B33 UXT-AS1-201ENST00000590504 1525 ntBASIC17.26■□□□□ 0.35
CLDN23Q96B33 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 CROCCP3-202ENST00000420820 1947 ntBASIC17.26■□□□□ 0.35
CLDN23Q96B33 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 MEIS3P1-201ENST00000495167 958 ntBASIC17.26■□□□□ 0.35
CLDN23Q96B33 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 AL009183.1-201ENST00000603760 355 ntBASIC17.26■□□□□ 0.35
CLDN23Q96B33 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN23Q96B33 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN23Q96B33 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 AL020996.1-203ENST00000536896 2307 ntBASIC17.25■□□□□ 0.35
CLDN23Q96B33 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN23Q96B33 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN23Q96B33 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 OR8S1-201ENST00000310194 1080 ntBASIC17.24■□□□□ 0.35
CLDN23Q96B33 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 AC109635.5-201ENST00000533593 962 ntBASIC17.24■□□□□ 0.35
CLDN23Q96B33 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 SPDYE22P-201ENST00000582158 798 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms