Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC148477.5-201ENST00000625164 1645 ntBASIC19.32■□□□□ 0.68
HPS3Q969F9 AC060834.1-201ENST00000443027 2032 ntBASIC19.32■□□□□ 0.68
HPS3Q969F9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HPS3Q969F9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.32■□□□□ 0.68
HPS3Q969F9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS3Q969F9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.32■□□□□ 0.68
HPS3Q969F9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HPS3Q969F9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HPS3Q969F9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
HPS3Q969F9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HPS3Q969F9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
HPS3Q969F9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.31■□□□□ 0.68
HPS3Q969F9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.31■□□□□ 0.68
HPS3Q969F9 AC111152.3-201ENST00000569699 673 ntBASIC19.31■□□□□ 0.68
HPS3Q969F9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.31■□□□□ 0.68
HPS3Q969F9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.31■□□□□ 0.68
HPS3Q969F9 AL732292.2-201ENST00000609649 430 ntBASIC19.31■□□□□ 0.68
HPS3Q969F9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.31■□□□□ 0.68
HPS3Q969F9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.31■□□□□ 0.68
HPS3Q969F9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.31■□□□□ 0.68
HPS3Q969F9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.31■□□□□ 0.68
HPS3Q969F9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.31■□□□□ 0.68
HPS3Q969F9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
HPS3Q969F9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS3Q969F9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.3■□□□□ 0.68
HPS3Q969F9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HPS3Q969F9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HPS3Q969F9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HPS3Q969F9 AC092053.1-201ENST00000605787 1936 ntBASIC19.3■□□□□ 0.68
HPS3Q969F9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.3■□□□□ 0.68
HPS3Q969F9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.3■□□□□ 0.68
HPS3Q969F9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.3■□□□□ 0.68
HPS3Q969F9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.3■□□□□ 0.68
HPS3Q969F9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.3■□□□□ 0.68
HPS3Q969F9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.3■□□□□ 0.68
HPS3Q969F9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.3■□□□□ 0.68
HPS3Q969F9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.3■□□□□ 0.68
HPS3Q969F9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.3■□□□□ 0.68
HPS3Q969F9 PMPCAP1-201ENST00000508114 1576 ntBASIC19.3■□□□□ 0.68
HPS3Q969F9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.3■□□□□ 0.68
HPS3Q969F9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 HCG11-201ENST00000411553 5696 ntBASIC19.3■□□□□ 0.68
HPS3Q969F9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.3■□□□□ 0.68
HPS3Q969F9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
HPS3Q969F9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HPS3Q969F9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.29■□□□□ 0.68
HPS3Q969F9 AC016396.2-201ENST00000562575 1417 ntBASIC19.29■□□□□ 0.68
HPS3Q969F9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HPS3Q969F9 MYCLP1-201ENST00000372451 1075 ntBASIC19.29■□□□□ 0.68
HPS3Q969F9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
HPS3Q969F9 POM121L3P-201ENST00000419331 1163 ntBASIC19.29■□□□□ 0.68
HPS3Q969F9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HPS3Q969F9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.29■□□□□ 0.68
HPS3Q969F9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.29■□□□□ 0.68
HPS3Q969F9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.29■□□□□ 0.68
HPS3Q969F9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HPS3Q969F9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.29■□□□□ 0.68
HPS3Q969F9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.29■□□□□ 0.68
HPS3Q969F9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS3Q969F9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HPS3Q969F9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.29■□□□□ 0.68
HPS3Q969F9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
HPS3Q969F9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms