Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 AC093525.9-201ENST00000624961 1746 ntBASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 IGHV3-52-201ENST00000519770 353 ntBASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 AL049757.1-201ENST00000616842 1596 ntBASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 AC005332.1-201ENST00000577698 1310 ntBASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 AC124067.4-201ENST00000519691 2379 ntBASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC83Q8IWF9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC83Q8IWF9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 KRT8P10-201ENST00000450021 1447 ntBASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 NTF6B-201ENST00000591913 560 ntBASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 AC005915.1-201ENST00000624912 2018 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms