Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUDCD3Q8IVD9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUDCD3Q8IVD9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUDCD3Q8IVD9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.36■□□□□ 0.37
NUDCD3Q8IVD9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUDCD3Q8IVD9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 TSPY7P-201ENST00000431358 1114 ntBASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 AC112698.1-201ENST00000510299 916 ntBASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 AC009154.2-201ENST00000621177 724 ntBASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 AC046158.3-201ENST00000624947 2558 ntBASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NUDCD3Q8IVD9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 AL139384.1-201ENST00000612143 3047 ntBASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NUDCD3Q8IVD9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.33■□□□□ 0.37
NUDCD3Q8IVD9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUDCD3Q8IVD9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms