Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 AC078925.2-201ENST00000624013 1973 ntBASIC14.54□□□□□ -0.08
ZNF546Q86UE3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF546Q86UE3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 AC022898.2-201ENST00000616822 1312 ntBASIC14.53□□□□□ -0.08
ZNF546Q86UE3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 AC133041.1-202ENST00000642053 222 ntBASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 AC104640.1-201ENST00000562617 2109 ntBASIC14.53□□□□□ -0.08
ZNF546Q86UE3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF546Q86UE3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms