Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 AC140113.3-201ENST00000605663 199 ntBASIC15.8■□□□□ 0.12
SHFQ7M4L6 AL031432.5-201ENST00000641059 760 ntBASIC15.8■□□□□ 0.12
SHFQ7M4L6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.8■□□□□ 0.12
SHFQ7M4L6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHFQ7M4L6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 GCSHP2-201ENST00000560971 527 ntBASIC15.79■□□□□ 0.12
SHFQ7M4L6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHFQ7M4L6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.79■□□□□ 0.12
SHFQ7M4L6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.78■□□□□ 0.12
SHFQ7M4L6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SHFQ7M4L6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.78■□□□□ 0.12
SHFQ7M4L6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.78■□□□□ 0.12
SHFQ7M4L6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.78■□□□□ 0.12
SHFQ7M4L6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.78■□□□□ 0.12
SHFQ7M4L6 AL138966.2-201ENST00000621997 464 ntBASIC15.78■□□□□ 0.12
SHFQ7M4L6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SHFQ7M4L6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.78■□□□□ 0.12
SHFQ7M4L6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHFQ7M4L6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms