Protein–RNA interactions for Protein: Q6NT52

CGB2, Choriogonadotropin subunit beta variant 2, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB2Q6NT52 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CGB2Q6NT52 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CGB2Q6NT52 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CGB2Q6NT52 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CGB2Q6NT52 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.08■□□□□ 0.32
CGB2Q6NT52 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CGB2Q6NT52 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.07■□□□□ 0.32
CGB2Q6NT52 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 AC112698.1-201ENST00000510299 916 ntBASIC17.07■□□□□ 0.32
CGB2Q6NT52 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB2Q6NT52 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CGB2Q6NT52 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 AC007663.1-201ENST00000438948 1240 ntBASIC17.06■□□□□ 0.32
CGB2Q6NT52 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 AC002558.1-201ENST00000488906 803 ntBASIC17.06■□□□□ 0.32
CGB2Q6NT52 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 AC144831.1-201ENST00000573312 2656 ntBASIC17.06■□□□□ 0.32
CGB2Q6NT52 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
CGB2Q6NT52 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB2Q6NT52 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CGB2Q6NT52 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB2Q6NT52 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB2Q6NT52 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB2Q6NT52 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.05■□□□□ 0.32
CGB2Q6NT52 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.05■□□□□ 0.32
CGB2Q6NT52 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB2Q6NT52 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CGB2Q6NT52 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.05■□□□□ 0.32
CGB2Q6NT52 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB2Q6NT52 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms