Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 AL139288.1-201ENST00000623748 933 ntBASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP4R3AQ6IN85 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 AC046185.3-201ENST00000623228 1824 ntBASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 AL356309.3-201ENST00000624132 1934 ntBASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 FAAHP1-202ENST00000446499 1238 ntBASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PPP4R3AQ6IN85 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 AC148477.5-201ENST00000625164 1645 ntBASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 AC004870.1-201ENST00000315132 882 ntBASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 NKAPP1-205ENST00000585790 367 ntBASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PPP4R3AQ6IN85 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms