Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 KRT8P23-201ENST00000560090 1207 ntBASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 UXT-AS1-201ENST00000590504 1525 ntBASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
VPS13DQ5THJ4 AC129492.6-201ENST00000611383 1305 ntBASIC11.58□□□□□ -0.55
VPS13DQ5THJ4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
VPS13DQ5THJ4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
VPS13DQ5THJ4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
VPS13DQ5THJ4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
VPS13DQ5THJ4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.55
VPS13DQ5THJ4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 AC079140.1-201ENST00000508039 487 ntBASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 TERF1P3-201ENST00000505638 1227 ntBASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 AC009407.1-201ENST00000568958 598 ntBASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 IGHV3-72-202ENST00000621503 303 ntBASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13DQ5THJ4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 TSSK5P-201ENST00000423978 907 ntBASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13DQ5THJ4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms