Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 MTDHP5-201ENST00000598980 586 ntBASIC18.43■□□□□ 0.54
VARS2Q5ST30 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LETM1P2-201ENST00000597330 2178 ntBASIC18.42■□□□□ 0.54
VARS2Q5ST30 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LINC00304-203ENST00000565008 1864 ntBASIC18.42■□□□□ 0.54
VARS2Q5ST30 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LST1-206ENST00000376090 689 ntTSL 2 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LST1-209ENST00000376096 565 ntTSL 2 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LST1-210ENST00000376099 610 ntTSL 2 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 IGLL3P-201ENST00000412472 434 ntBASIC18.42■□□□□ 0.54
VARS2Q5ST30 LST1-214ENST00000418507 726 ntTSL 2 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 OR7E47P-204ENST00000575924 449 ntBASIC18.42■□□□□ 0.54
VARS2Q5ST30 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 AC092865.6-201ENST00000642101 219 ntBASIC18.42■□□□□ 0.54
VARS2Q5ST30 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 AC002310.6-201ENST00000624451 1377 ntBASIC18.42■□□□□ 0.54
VARS2Q5ST30 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.42■□□□□ 0.54
VARS2Q5ST30 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARS2Q5ST30 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.41■□□□□ 0.54
VARS2Q5ST30 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.41■□□□□ 0.54
VARS2Q5ST30 PI4KAP1-204ENST00000612579 1703 ntBASIC18.41■□□□□ 0.54
VARS2Q5ST30 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.41■□□□□ 0.54
VARS2Q5ST30 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.41■□□□□ 0.54
VARS2Q5ST30 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VARS2Q5ST30 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.41■□□□□ 0.54
VARS2Q5ST30 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.41■□□□□ 0.54
VARS2Q5ST30 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.41■□□□□ 0.54
VARS2Q5ST30 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.41■□□□□ 0.54
VARS2Q5ST30 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
VARS2Q5ST30 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARS2Q5ST30 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VARS2Q5ST30 MCCD1P2-201ENST00000423228 335 ntBASIC18.4■□□□□ 0.54
VARS2Q5ST30 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms