Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CXCR4P61073 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 AC092053.1-201ENST00000605787 1936 ntBASIC15.92■□□□□ 0.14
CXCR4P61073 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 AC105917.1-201ENST00000506637 2539 ntBASIC15.92■□□□□ 0.14
CXCR4P61073 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.92■□□□□ 0.14
CXCR4P61073 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.92■□□□□ 0.14
CXCR4P61073 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.92■□□□□ 0.14
CXCR4P61073 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.92■□□□□ 0.14
CXCR4P61073 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.92■□□□□ 0.14
CXCR4P61073 C2orf69P3-201ENST00000565542 1120 ntBASIC15.92■□□□□ 0.14
CXCR4P61073 AL139327.4-201ENST00000612362 153 ntBASIC15.92■□□□□ 0.14
CXCR4P61073 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CXCR4P61073 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCR4P61073 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CXCR4P61073 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CXCR4P61073 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.92■□□□□ 0.14
CXCR4P61073 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.92■□□□□ 0.14
CXCR4P61073 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.92■□□□□ 0.14
CXCR4P61073 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCR4P61073 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCR4P61073 KRT8P47-201ENST00000604727 1398 ntBASIC15.91■□□□□ 0.14
CXCR4P61073 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 AC092171.3-201ENST00000610122 2651 ntBASIC15.91■□□□□ 0.14
CXCR4P61073 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCR4P61073 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCR4P61073 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.91■□□□□ 0.14
CXCR4P61073 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.91■□□□□ 0.14
CXCR4P61073 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCR4P61073 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 AC010653.2-201ENST00000623505 997 ntBASIC15.91■□□□□ 0.14
CXCR4P61073 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCR4P61073 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCR4P61073 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CXCR4P61073 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCR4P61073 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CXCR4P61073 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 MIR1238-201ENST00000408483 83 ntBASIC15.9■□□□□ 0.14
CXCR4P61073 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCR4P61073 TSPY7P-201ENST00000431358 1114 ntBASIC15.9■□□□□ 0.14
CXCR4P61073 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 SEC1P-202ENST00000473944 940 ntBASIC15.9■□□□□ 0.14
CXCR4P61073 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 MIR4785-201ENST00000585005 73 ntBASIC15.9■□□□□ 0.14
CXCR4P61073 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCR4P61073 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms