Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PAX9P55771 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PAX9P55771 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PAX9P55771 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.02□□□□□ -0.17
PAX9P55771 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.02□□□□□ -0.17
PAX9P55771 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.02□□□□□ -0.17
PAX9P55771 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PAX9P55771 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.01□□□□□ -0.17
PAX9P55771 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.01□□□□□ -0.17
PAX9P55771 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PAX9P55771 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PAX9P55771 KRT89P-201ENST00000620027 1478 ntBASIC14.01□□□□□ -0.17
PAX9P55771 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 RBM17P1-201ENST00000453646 1190 ntBASIC14.01□□□□□ -0.17
PAX9P55771 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.01□□□□□ -0.17
PAX9P55771 AC124947.2-201ENST00000547118 1133 ntBASIC14.01□□□□□ -0.17
PAX9P55771 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.01□□□□□ -0.17
PAX9P55771 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.01□□□□□ -0.17
PAX9P55771 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PAX9P55771 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.01□□□□□ -0.17
PAX9P55771 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX9P55771 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14□□□□□ -0.17
PAX9P55771 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PAX9P55771 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PAX9P55771 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14□□□□□ -0.17
PAX9P55771 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PAX9P55771 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PAX9P55771 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PAX9P55771 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14□□□□□ -0.17
PAX9P55771 AC008550.1-201ENST00000511500 884 ntBASIC14□□□□□ -0.17
PAX9P55771 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14□□□□□ -0.17
PAX9P55771 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14□□□□□ -0.17
PAX9P55771 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14□□□□□ -0.17
PAX9P55771 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14□□□□□ -0.17
PAX9P55771 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14□□□□□ -0.17
PAX9P55771 AC024563.2-201ENST00000603282 481 ntBASIC14□□□□□ -0.17
PAX9P55771 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14□□□□□ -0.17
PAX9P55771 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14□□□□□ -0.17
PAX9P55771 AC009154.2-201ENST00000621177 724 ntBASIC14□□□□□ -0.17
PAX9P55771 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14□□□□□ -0.17
PAX9P55771 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14□□□□□ -0.17
PAX9P55771 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PAX9P55771 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14□□□□□ -0.17
PAX9P55771 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14□□□□□ -0.17
PAX9P55771 AC132872.4-202ENST00000622924 2756 ntBASIC14□□□□□ -0.17
PAX9P55771 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PAX9P55771 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PAX9P55771 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PAX9P55771 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PAX9P55771 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms