Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.01■□□□□ 0.79
HMGCS2P54868 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.01■□□□□ 0.79
HMGCS2P54868 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMGCS2P54868 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS2P54868 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS2P54868 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS2P54868 AC138028.4-201ENST00000564984 1845 ntBASIC20.01■□□□□ 0.79
HMGCS2P54868 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS2P54868 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HMGCS2P54868 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
HMGCS2P54868 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCS2P54868 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HMGCS2P54868 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS2P54868 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HMGCS2P54868 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS2P54868 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMGCS2P54868 AC087289.5-201ENST00000586076 3175 ntBASIC20■□□□□ 0.79
HMGCS2P54868 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20■□□□□ 0.79
HMGCS2P54868 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS2P54868 AC004408.2-201ENST00000623613 2777 ntBASIC20■□□□□ 0.79
HMGCS2P54868 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMGCS2P54868 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20■□□□□ 0.79
HMGCS2P54868 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20■□□□□ 0.79
HMGCS2P54868 AL139327.4-201ENST00000612362 153 ntBASIC20■□□□□ 0.79
HMGCS2P54868 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS2P54868 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20■□□□□ 0.79
HMGCS2P54868 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20■□□□□ 0.79
HMGCS2P54868 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20■□□□□ 0.79
HMGCS2P54868 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS2P54868 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20■□□□□ 0.79
HMGCS2P54868 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HMGCS2P54868 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS2P54868 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGCS2P54868 AC009113.1-201ENST00000570267 2443 ntBASIC20■□□□□ 0.79
HMGCS2P54868 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.99■□□□□ 0.79
HMGCS2P54868 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS2P54868 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS2P54868 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS2P54868 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS2P54868 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HMGCS2P54868 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCS2P54868 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HMGCS2P54868 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS2P54868 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.99■□□□□ 0.79
HMGCS2P54868 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS2P54868 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS2P54868 TIMM8BP1-201ENST00000452384 211 ntBASIC19.99■□□□□ 0.79
HMGCS2P54868 LINC00628-201ENST00000628516 1289 ntBASIC19.99■□□□□ 0.79
HMGCS2P54868 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCS2P54868 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.99■□□□□ 0.79
HMGCS2P54868 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS2P54868 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.99■□□□□ 0.79
HMGCS2P54868 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGCS2P54868 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGCS2P54868 AC129492.6-201ENST00000611383 1305 ntBASIC19.99■□□□□ 0.79
HMGCS2P54868 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGCS2P54868 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
HMGCS2P54868 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS2P54868 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS2P54868 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGCS2P54868 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS2P54868 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS2P54868 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS2P54868 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HMGCS2P54868 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.98■□□□□ 0.79
HMGCS2P54868 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS2P54868 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGCS2P54868 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.98■□□□□ 0.79
HMGCS2P54868 AC025678.2-201ENST00000562061 970 ntBASIC19.98■□□□□ 0.79
HMGCS2P54868 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS2P54868 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.98■□□□□ 0.79
HMGCS2P54868 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS2P54868 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HMGCS2P54868 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCS2P54868 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGCS2P54868 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGCS2P54868 AC020763.4-201ENST00000623414 4170 ntBASIC19.98■□□□□ 0.79
HMGCS2P54868 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS2P54868 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS2P54868 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCS2P54868 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS2P54868 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCS2P54868 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS2P54868 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HMGCS2P54868 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS2P54868 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCS2P54868 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS2P54868 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS2P54868 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCS2P54868 AC002056.1-201ENST00000395613 760 ntBASIC19.97■□□□□ 0.79
HMGCS2P54868 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGCS2P54868 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HMGCS2P54868 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.97■□□□□ 0.79
HMGCS2P54868 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCS2P54868 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HMGCS2P54868 AC093520.2-201ENST00000561830 333 ntBASIC19.97■□□□□ 0.79
HMGCS2P54868 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS2P54868 AC099522.2-201ENST00000607001 744 ntBASIC19.97■□□□□ 0.79
HMGCS2P54868 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCS2P54868 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms